Auteurs, date et publication :
Auteurs Pablo Raguet , Sabine Houot , Denis Montenach , Alain Mollier , Noura Ziadi , Antoine Karam , Christian Morel
Publication : Nutrient Cycling in Agroecosystems
Date : 2024
Catégorie(s)
#INRAE #PRO #PRO ColmarRésumé
The anaerobic digestion industry, which is still developing, generates biogas from organic waste products. A coproduct of this process, digestate, is increasingly produced and can be recycled on agricultural land as an alternative to mineral fertilizers. Biogas digestate is a recent product whose chemical composition differs from that of its source material, and additional data still need to be acquired on its effects on dissolved carbon fluxes. The objectives of this study were to assess (i) the effects of applying biogas digestate on dissolved organic carbon (DOC) and dissolved inorganic carbon (DIC) fluxes with different winter crops, (ii) the dynamics of DOC and DIC concentrations during the drainage season, and (iii) the annual dynamics of DOC and DIC fluxes along the soil profile. The study examined effects of applying biogas digestate, pig slurry, or a mineral fertilizer to winter wheat and two catch crops (mustard and a multispecies crop) on DOC and DIC fluxes in the soil. Lysimeters at 40 cm (topsoil) and 90 cm (subsoil) depths were monitored from 2014 to 2023, from November to March (i.e., 9 winter drainage seasons). During the drainage season, the DOC concentration was highest with digestate, and its timing depended on development of the cover crop: from the beginning of the drainage season for mustard and the multispecies crop and around February for wheat. Applying digestate increased the topsoil DOC fluxes (mean of 35.7 ± 13.7 kg.ha 1 with digestate vs. 21.0 ± 6.7 kg.ha 1 with the other treatments), particularly under mustard. Topsoil DIC fluxes were highest with pig slurry due to higher mineralization than that with digestate (mean of 59.1 ± 22.8 kg.ha 1 with pig slurry vs. 46.2 ± 16.3 kg.ha 1 with the other treatments). In the subsoil, DOC fluxes were low (6.2 ± 4.1 kg.ha 1) and DIC fluxes were high (80.0 ± 45.7 kg.ha 1), with no difference among treatments.
Auteurs, date et publication :
Auteurs Anne-Flore Didelot , Emilie Jardé , Thierry Morvan , Charlotte Lemoine , Florian Gaillard , Gaëlle Hamelin , Anne Jaffrezic
Publication : Agriculture, Ecosystems & Environment
Date : 2025
Volume : 378
Pages : 109285
Catégorie(s)
#INRAE #PRO #PRO EFELERésumé
Applying organic waste products (OWPs) and sowing cover crops are agronomic practices to improve soil health. OWPs can be used in anaerobic digestion. Because microorganisms consume some of the labile molecules, persistent molecules accumulate in digestate. Few studies have investigated the transfer of dissolved organic matter (DOM) in soil that received digestate. Previously, effects of digestate application on dissolved organic carbon (DOC) were compared to those of the original pig slurry under wheat and a mustard catch crop for nine years at a lysimeter experimental site. DOC concentrations after digestate application were higher in the topsoil every year, due to crop development, but did not differ between treatments in the subsoil. The objectives of this study were to determine whether the observed differences in DOC concentrations caused DOM composition to differ, to identify sources (e.g., digestate, root exudation) that may have contributed to the DOM pool and to assess the DOM composition in the subsoil. The DOM composition of lysimeter samples and water extracts from the OWPs applied were analyzed by thermochemolysis coupled with gas chromatography and mass spectrometry, which identified plant- and microbial-derived biomarkers. Under mustard, the DOM pool seemed to contain mainly persistent molecules from digestate that were desorbed due to the increase in pH caused by nitrate uptake. Under wheat, the DOC pool seemed supplied by both digestate and root exudation. After applying digestate, plant-derived molecules decreased, while microbial-derived molecules increased, as depth increased, and molecules may have been sorbed from the topsoil to subsoil.
Auteurs, date et publication :
Auteurs Anne-Flore Didelot , Anne Jaffrezic , Thierry Morvan , Marine Liotaud , Florian Gaillard , Emilie Jardé
Publication : Organic Geochemistry
Date : 2025
Volume : 200
Pages : 104923
Catégorie(s)
#INRAE #PRO #PRO EFELERésumé
Macroinvertebrates play a central role in processes supporting soil fertility. In the framework of the ecological intensification of agriculture, the choice of management practices should be guided by their ability to support these beneficial organisms supplying ecosystem services. This study aims at investigating the specific effect of partial substitution of synthetic fertilizers by locally produced organic fertilizers at a similar level of major nutrient inputs on macroinvertebrate abundance and diversity in sugarcane agroecosystems, on a Nitisol. Invertebrates visible to the naked eye were sampled in 2013, 2016, 2019 and 2023 using the standardized TSBF method on a long-term experimental field trial in R´eunion island. The individuals were identified and soil samples were analyzed for physico-chemical properties. Despite the low response of macroinvertebrates to the fertilizer type, total macroinvertebrate abundance increased over time, especially isopods and earthworms. The input of organic carbon via the return of litter to the soil surface and the root turnover after each harvest enables soil macroinvertebrates to be more abundant even after replanting tillage. Mulching and root turnover are therefore important levers to consider for promoting macroinvertebrates in sugarcane agroecosystems.
Auteurs, date et publication :
Auteurs Estelle Jacquin , Marie-Liesse Vermeire , Eric Blanchart , Charles Detaille , François-Régis Goebel , Janine Jean , Malalatiana Razafindrakoto , Matthieu N. Bravin
Publication : Agriculture, Ecosystems & Environment
Date : 2025
Volume : 381
Pages : 109431
Catégorie(s)
#INRAE #PRO #PRO ReunionRésumé
A range of agroecological practices allow to increase soil organic carbon (SOC) stocks, which makes a positive impact on climate change mitigation and soil health, but the permanence of this additional SOC storage can be questioned, in particular in a climate change context. Increased temperatures, accentuated evaporation of terrestrial water and increased atmosphere moisture content are anticipated, resulting in more frequent droughts and heavy precipitation events. Understanding the SOC dynamics and assessing the sensitivity of carbon mineralization to these climatic events is necessary to anticipate future carbon losses in terrestrial ecosystems. To this respect, it seems relevant to investigate carbon-storing soils as increased carbon mineralization induced by climate change may limit the carbon storing potential in agricultural soils. Thus, we evaluated the sensitivity of SOC mineralization to increased temperature, decreased soil moisture and drying-rewetting cycles using soils from long-term field experiments. We performed an incubation experiment on topsoil (0–30 cm) samples from temperate luvisols that had been under 20 years under conservation agriculture (CA), organic agriculture (ORG) and conventional agriculture (CON-LC) at the La Cage experiment, and under organic waste products (OWPs) applications in QualiAgro experiment, including biowaste composts (BIOW), residual municipal solid waste composts (MSW), farmyard manure (FYM) and conventional agriculture without organic inputs (CON-QA). Soil samples were incubated in the lab for 3 months under different temperature conditions (20, 28 and 35 °C) or under different moisture conditions (matric potential: pF1.5; pF 2.5 and pF 4.2) or under several dry (pF 4.2)-wet (pF 1.5) cycles (DWC). The results shown that, whatever the agricultural practices, soil moisture regime and temperature significantly affect the SOC mineralization. Overall, the DWC did not stimulate soil carbon mineralization relative to wet controls (pF1.5 and pF2.5). Whatever the soil moisture regime and temperature, specific carbon mineralization was similar between agricultural practices at La Cage, while at QualiAgro, specific carbon mineralization was lower in soils receiving organic waste products (OWPs) compared to the baseline soil. These results suggest a strong carbon stabilization by OWPs in soils as assessed by laboratory incubation experiments. Within each long-term experiment, we observed no significant difference between the carbon-storing soils (CA, ORG, MSW, FYM and BIOW) and their respective baseline soils (CON-LC and CON-QA) in the delta SOC mineralized whatever the soil moisture regime. The Q10 also indicated no significant difference between carbon-storing soils and their respective baseline soils. These results indicate that the SOC mineralization in carbon-storing soils had a similar sensitivity to the soil moisture regime and temperature as the baseline ones. Hence, the implementation of these agroecological practices appears beneficial for climate change mitigation, even in the context of extreme climatic events.
Auteurs, date et publication :
Auteurs Tchodjowiè P. I. Kpemoua , Sarah Leclerc , Pierre Barré , Sabine Houot , Valérie Pouteau , Cédric Plessis , Claire Chenu
Publication : Soil Biology and Biochemistry
Date : 2023
Volume : 183
Pages : 109043
Catégorie(s)
#ANR-Citation #INRAE #PRO #PRO QualiAgroRésumé
Recycling organic waste (OW) in agriculture can improve soil fertility and substitute chemical fertilizers depending on the OW and their treatment. The effects of OW have often been studied in simplified cropping systems to strengthen the observed effects. The objective of this study was thus to evaluate the long-term effects of different types of OW used at European regulatory rates on C storage, crop yields and N, P, and K dynamics. OW has been applied every 2 years at 170 kg N ha-1 since 2001 in the long-term field experiment PROspective in northeastern France on a silty loam calcosol. The 5 types of OW included urban sewage sludge (SLU), green waste and SLU compost (GWS), municipal biowaste compost (BIO), farmyard manure (FYM), and composted FYM (FYMC). The control treatment (CON) did not receive any OW. All treatments were studied after applying (N + ) or not applying (N-) mineral N fertilization at an annual optimal rate. Biowaste digestate was also applied after 2014 in N- treatments. OW application increased crop yield compared with the unfertilized control. Mineral N fertilizer partially substituted by OW allowed crop yield to be sustained compared with mineral fertilizer only, saving 18–54% mineral N fertilizer, 56–80% mineral P fertilizer and 14–76% mineral K fertilizer. No effects on crop grain N, P and K concentrations were found. The efficiency of OW to maintain SOC, total N, Olsen-P and exchangeable K contents in soils greatly varied with the type of OW. Except for SLU, the SOC stocks significantly increased from + 2.9 to + 7.0 t SOC ha-1 for FYMC_N- and BIO_N-, respectively. SLU and digestate had the greatest N fertilizer replacement value (58% and 69%, respectively). N-leaching risk did not increase with OW application in the long term. For a positive ΔP of 100 kg ha-1, Olsen-P increased by 2 mg P kg-1 in the GWS_Nand SLU_N- treatments, whereas Olsen-P decreased in other treatments. A surplus of + 100 kg ha-1 ΔK raised the exchangeable K stock by 20 and 21 kg K ha-1 in the FYM_N- and FYMC_N- treatments, respectively, whereas exchangeable K decreased in the BIO and GWS treatments. Our results highlight the ability of all tested types of OW to sustain crop yields in the long term when used at EU regulatory rates, while their effects on mineral fertilizer savings, SOC, soil mineral N, Olsen-P, and exchangeable K contents greatly varied according to the considered OW.
Auteurs, date et publication :
Auteurs Haotian Chen , Florent Levavasseur , Denis Montenach , Marc Lollier , Christian Morel , Sabine Houot
Publication : Soil and Tillage Research
Date : 2025
Volume : 221
Pages : 105415
Catégorie(s)
#INRAE #PRO #PRO Colmar #PRO QualiAgroRésumé
A new version of the Century ecosystem model, modified to better represent chemically and physically recalcitrant organic amendments by allowing the addition of organic waste products (OWP) as a mixture of plant material and surface slow soil organic matter (SOM) controlled by the Indicator of Residual Organic Carbon (IROC), and field observations from a 16-year wheat corn rotation experiment near Paris, France, were used to assess the long-term impacts of applying agricultural and municipal organic waste products (OWP) on soil carbon (C) sequestration, grain C and nutrient content, and soil nutrient status. Sixteen years of observed grain C, nitrogen (N), phosphorus (P), and potassium (K) and soil C and nutrient data were used to calibrate and validate the performance of IROC-Century. A suite of future management scenarios, simulated using this calibrated model, explored multiple frequencies of applications of OWP and fertilizer to evaluate their long-term impacts on grain C and nutrient content, soil C sequestration, and NO3− leaching. The model effectively simulated the impact of biennial additions of four OWP types on soil C, N, P, and K during the 16-year experiment. Measured and simulated OWP +fertilizer resulted in higher soil C (highest for well-decomposed [55%] vs. less-decomposed [37%] OWP) and N content, while total soil accumulation of N, P, and K was determined by the content of the OWP, regardless of IROC, and OWP greatly reduced the need to add chemical fertilizer while increasing crop production and N, P, and K uptake by the crop. Simulation scenarios using IROC-Century for future management suggest that the optimal cropping management system to maintain high corn and wheat production and reduce NO3− leaching is to apply OWP biennially for 12 years along with fertilizer and then reduce OWP to every fourth year while continuing to add fertilizer to the wheat crop only. However, reducing the number of OWP additions in these scenarios did decrease the rate of soil carbon sequestration.
Auteurs, date et publication :
Auteurs William J. Parton , Robin H. Kelly , Melannie D. Hartman , Agathe Revallier , Ana Barbara Bisinella de Faria , Gabriela Naves-Maschietto , Marie Orvain , Sabine Houot , Maria Albuquerque , Sebastian Kech
Publication : Soil Science Society of America Journal
Date : 2025
Volume : 87
Issue : 4
Pages : 885-901
Catégorie(s)
#ANR-Citation #INRAE #PRO #PRO QualiAgroRésumé
The influence of dry-wet cycles (DWC) on soil organic carbon (SOC) decomposition is still debated given the somehow controversial results observed in the literature. The objective of this study was to evaluate the effects of DWC on SOC mineralization relative to various moisture controls in 7 treatments from two long-term French field experiments presenting contrasted SOC concentrations. A laboratory incubation was conducted for 97 days to quantify CO2 emissions upon four soil moisture scenarios: continuously wet scenario at pF 1.5 (WET), continuously moderate wet scenario at pF 2.5 (MWET), continuously dry scenario at pF 4.2 (DRY) and dry-wet cycles (DWC) between pF 1.5 and 4.2. Each cycle contained two phases, 10 days of drying phase, followed by 7 days of moist phase after rewetting. The drying phase consisted of adding silica gel to the incubation jars to absorb water in the soil and then gradually drying the soil. We also calculated the SOC mineralization that would correspond to the average water content in DWC (mean_DWC). Our results showed that across all treatments the daily carbon mineralization rate increased with soil moisture (WET > MWET > DRY). In DWC scenario, mineralization rates fluctuated with the changes in soil moisture. As soils dried, daily mineralization rates decreased and the subsequent soil rewetting, to pF 1.5, caused a rapid mineralization flush or “Birch effect”. However, these flushes did not compensate for the low mineralization rates in the drying phase as the cumulative mineralization was not higher in the DWC scenario compared to the mean_DWC which was the scenario with equivalent water content as the DWC. We also observed that not accounting the CO2 emissions in the drying phase, could lead to an overestimation of the effect of DWC. We recommend to measure continuously the soil respiration during dry-wet experiments and to compare the CO2 emitted in DWC with a control that has a water content equivalent to the average water content in DWC. In addition, we questioned the importance of the effect of DWC on overall soil respiration.
Auteurs, date et publication :
Auteurs Tchodjowiè P. I. Kpemoua , Pierre Barré , Sabine Houot , Claire Chenu
Publication : Soil Biology and Biochemistry
Date : 2023
Volume : 180
Pages : 109007
Catégorie(s)
#INRAE #PRO #PRO QualiAgroRésumé
Changes in soil organic carbon (SOC) stocks are a major source of uncertainty for the evolution of atmospheric CO2 concentration during the 21st century. They are usually simulated by models dividing SOC into conceptual pools with contrasted turnover times. The lack of reliable methods to initialize these models, by correctly distributing soil carbon amongst their kinetic pools, strongly limits the accuracy of their simulations. Here, we demonstrate that PARTYSOC, a machine-learning model based on Rock-Eval® thermal analysis, optimally partitions the active- and stable-SOC pools of AMG, a simple and well-validated SOC dynamics model, accounting for effects of soil management history. Furthermore, we found that initializing the SOC pool sizes of AMG using machine learning strongly improves its accuracy when reproducing the observed SOC dynamics in nine independent French long-term agricultural experiments. Our results indicate that multi-compartmental models of SOC dynamics combined with a robust initialization can simulate observed SOC stock changes with excellent precision. We recommend exploring their potential before a new generation of models of greater complexity becomes operational. The approach proposed here can be easily implemented on soil monitoring networks, paving the way towards precise predictions of SOC stock changes over the next decades.
Auteurs, date et publication :
Auteurs Eva Kanari , Lauric Cécillon , François Baudin , Hugues Clivot , Fabien Ferchaud , Sabine Houot , Florent Levavasseur , Bruno Mary , Laure Soucémarianadin , Claire Chenu , Pierre Barré
Publication : Biogeosciences
Date : 2022
Volume : 19
Issue : 2
Pages : 375-387
Catégorie(s)
#INRAE #PRO #PRO QualiAgroRésumé
Microorganisms in soil are known to be a source and a sink of volatile organic compounds (VOCs). The role of the microbial VOCs on soil ecosystem regulation has been increasingly demonstrated in the recent years. Nevertheless, little is known about the influence of the microbial soil community structure and diversity on VOC emissions. This novel study analyzed the effect of reduced microbial diversity in soil on VOC emissions. We found that reduced levels of microbial diversity in soil increased VOC emissions from soils, while the number of different VOCs emitted decreased. Furthermore, we found that Proteobacteria, Bacteroidetes and fungi phyla were positively correlated to VOC emissions, and other prokaryotic phyla were either negatively correlated or very slightly positively correlated to VOCs emissions. Our interpretation is that Proteobacteria, Bacteroidetes and fungi were VOC producers while the other prokaryotic phyla were consumers. Finally, we discussed the possible role of VOCs as mediators of microbial interactions in soil.
Auteurs, date et publication :
Auteurs Letizia Abis , Benjamin Loubet , Raluca Ciuraru , Florence Lafouge , Sabine Houot , Virginie Nowak , Julie Tripied , Samuel Dequiedt , Pierre Alain Maron , Sophie Sadet-Bourgeteau
Publication : Scientific Reports
Date : 2020
Volume : 10
Issue : 1
Pages : 6104